Here is a list of all documented class members with links to the class documentation for each member:

- o -

• off_ : LocARNA::OMatrix< elem_t >
• offset_ : LocARNA::RMatrix< elem_t >
• OMatrix() : LocARNA::OMatrix< elem_t >
• operator pos_type() : LocARNA::EdgeEnd
• operator value_t() : LocARNA::SparseMatrix< T >::element , LocARNA::SparseVector< T >::element
• operator!=() : LocARNA::MultipleAlignment::AliColumn , LocARNA::type_wrapper< T > , LocARNA::Gap
• operator()() : LocARNA::DiscreteDistribution , LocARNA::RMatrix< elem_t > , LocARNA::OMatrix< elem_t > , LocARNA::greater_second< T > , LocARNA::OMatrix< elem_t > , LocARNA::RotMatrix< elem_t > , LocARNA::ArcMatches::lex_greater_left_ends , LocARNA::RotMatrix< elem_t > , LocARNA::Matrix< T > , LocARNA::pair_of_size_t_hash , LocARNA::Matrix< T > , LocARNA::SparseMatrix< T > , LocARNA::BasePairFilter::BPMinLoopSize , LocARNA::SparseMatrix< T > , LocARNA::BasePairFilter::SpanRange , LocARNA::BasePairFilter::Canonical
• operator+() : LocARNA::type_wrapper< T > , LocARNA::TaintedInftyInt , LocARNA::InftyInt , LocARNA::FiniteInt , LocARNA::type_wrapper< T >
• operator++() : LocARNA::type_wrapper< T >
• operator+=() : LocARNA::InftyInt , LocARNA::MultipleAlignment , LocARNA::plusvector< T > , LocARNA::SparseMatrix< T >::element , LocARNA::SparseVector< T >::element
• operator- : LocARNA::TaintedInftyInt , LocARNA::InftyInt , LocARNA::FiniteInt , LocARNA::type_wrapper< T >
• operator--() : LocARNA::type_wrapper< T >
• operator-=() : LocARNA::InftyInt
• operator< : LocARNA::TaintedInftyInt , LocARNA::type_wrapper< T >
• operator<< : LocARNA::TaintedInftyInt , LocARNA::Ribosum , LocARNA::RibosumFreq
• operator<= : LocARNA::TaintedInftyInt , LocARNA::type_wrapper< T >
• operator=() : LocARNA::Aligner , LocARNA::string1 , LocARNA::RnaEnsemble , LocARNA::SparseVector< T >::element , LocARNA::TaintedInftyInt , LocARNA::SparseMatrix< T >::element , LocARNA::Alignment , LocARNA::InftyInt
• operator== : LocARNA::TaintedInftyInt , LocARNA::Gap , LocARNA::RnaStructure , LocARNA::type_wrapper< T > , LocARNA::MultipleAlignment::AliColumn
• operator> : LocARNA::TaintedInftyInt , LocARNA::type_wrapper< T >
• operator>= : LocARNA::TaintedInftyInt , LocARNA::type_wrapper< T >
• operator[]() : LocARNA::string1 , LocARNA::MultipleAlignment::AliColumn , LocARNA::SparseVector< T > , LocARNA::Sequence , LocARNA::string1 , LocARNA::SparseVector< T >
• optimize() : LocARNA::FitOnOff
• optimize_consensus_structure() : LocARNA::Aligner
• orderedMapCITER : LocARNA::PatternPairMap
• orderedMapITER : LocARNA::PatternPairMap
• orderedMapTYPE : LocARNA::PatternPairMap
• other : LocARNA::Gap
• output_clustal() : LocARNA::LCSEPM
• output_locarna() : LocARNA::LCSEPM
• overwrite() : LocARNA::EPM