- w -

• what() : LocARNA::failure
• write() : LocARNA::MatchProbs , LocARNA::MultipleAlignment , LocARNA::MatchProbs , LocARNA::MultipleAlignment
• write_arcmatch_probabilities() : LocARNA::AlignerP
• write_arcmatch_scores() : LocARNA::ArcMatches
• write_basematch_probabilities() : LocARNA::AlignerP
• write_debug() : LocARNA::AlignmentImpl , LocARNA::MultipleAlignment
• write_ICC_code() : LocARNA::RibosumFreq
• write_matrix() : LocARNA::Ribosum , LocARNA::RibosumFreq
• write_name_sequence_line() : LocARNA::MultipleAlignment
• write_pp() : LocARNA::ExtRnaData , LocARNA::RnaData
• write_pp_arc_probabilities() : LocARNA::RnaDataImpl
• write_pp_basepair_in_loop_probabilities() : LocARNA::ExtRnaDataImpl
• write_pp_in_loop_probabilities() : LocARNA::ExtRnaDataImpl
• write_pp_in_loop_probability_line() : LocARNA::ExtRnaDataImpl
• write_pp_sequence() : LocARNA::RnaDataImpl
• write_pp_unpaired_in_loop_probabilities() : LocARNA::ExtRnaDataImpl
• write_size_info() : LocARNA::RnaData , LocARNA::ExtRnaData
• write_sparse() : LocARNA::MatchProbs
• write_viterbi_path() : LocARNA::FitOnOff
• write_viterbi_path_compact() : LocARNA::FitOnOff