LocARNA-1.9.2
LocARNA::McC_ali_matrices_t Member List
This is the complete list of members for LocARNA::McC_ali_matrices_t, including all inherited members.
a2s(size_t s, size_t i) const LocARNA::McC_ali_matrices_t [inline]
bppm(size_t i, size_t j) const LocARNA::McC_matrices_base [inline]
exp_params() const LocARNA::McC_matrices_base [inline]
expMLbase(size_t i) const LocARNA::McC_matrices_base [inline]
iidx(size_t i, size_t j) const LocARNA::McC_matrices_base [inline]
jidx(size_t i, size_t j) const LocARNA::McC_matrices_base [inline]
kT() const LocARNA::McC_matrices_base [inline]
McC_ali_matrices_t(vrna_fold_compound_t *vc)LocARNA::McC_ali_matrices_t [explicit]
McC_matrices_base(vrna_fold_compound_t *vc)LocARNA::McC_matrices_base [explicit, protected]
pair(size_t c, size_t d) const LocARNA::McC_matrices_base [inline]
pscore(size_t i, size_t j) const LocARNA::McC_ali_matrices_t [inline]
q1k(size_t k) const LocARNA::McC_matrices_base [inline]
qb(size_t i, size_t j) const LocARNA::McC_matrices_base [inline]
qln(size_t l) const LocARNA::McC_matrices_base [inline]
qm(size_t i, size_t j) const LocARNA::McC_matrices_base [inline]
S(size_t s, size_t i) const LocARNA::McC_ali_matrices_t [inline]
S3(size_t s, size_t i) const LocARNA::McC_ali_matrices_t [inline]
S5(size_t s, size_t i) const LocARNA::McC_ali_matrices_t [inline]
scale(size_t i) const LocARNA::McC_matrices_base [inline]
Ss(size_t s) const (defined in LocARNA::McC_ali_matrices_t)LocARNA::McC_ali_matrices_t [inline]
vc_LocARNA::McC_matrices_base [protected]
~McC_ali_matrices_t()LocARNA::McC_ali_matrices_t [virtual]
~McC_matrices_base()LocARNA::McC_matrices_base [virtual]
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