LocARNA-1.9.2
LocARNA::LCSEPM Member List
This is the complete list of members for LocARNA::LCSEPM, including all inherited members.
anchor_annotation()LocARNA::LCSEPM
calculateLCSEPM(bool quiet)LocARNA::LCSEPM
LCSEPM(const Sequence &seqA_, const Sequence &seqB_, const PatternPairMap &myPatterns, PatternPairMap &myLCSEPM)LocARNA::LCSEPM [inline]
MapToPS(const std::string &sequenceA, const std::string &sequenceB, PatternPairMap &myMap, const std::string &file1, const std::string &file2)LocARNA::LCSEPM
output_clustal(const std::string &outfile_name)LocARNA::LCSEPM
output_locarna(const std::string &sequenceA, const std::string &sequenceB, const std::string &outfile)LocARNA::LCSEPM
~LCSEPM()LocARNA::LCSEPM [virtual]
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