LocARNA-1.9.2
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a_ | LocARNA::AlignmentImpl | |
AlignmentImpl(Alignment *self, const Sequence &seqA, const Sequence &seqB) | LocARNA::AlignmentImpl | [inline] |
b_ | LocARNA::AlignmentImpl | |
dot_bracket_structure(const std::string &str, const Alignment::edge_ends_t &x) | LocARNA::AlignmentImpl | [static] |
self_ | LocARNA::AlignmentImpl | |
seqA_ | LocARNA::AlignmentImpl | |
seqB_ | LocARNA::AlignmentImpl | |
strA_ | LocARNA::AlignmentImpl | |
strB_ | LocARNA::AlignmentImpl | |
write_debug(std::ostream &out) const | LocARNA::AlignmentImpl | |
write_debug(std::ostream &out, const Alignment::edge_ends_t &ends) | LocARNA::AlignmentImpl | [static] |