- CSequence : State.hh
- dummyCall() : RNAFreeEnergy_TB.cc
- encode_char() : RNAFreeEnergy_TB.cc
- energy_of_struct() : RNAFreeEnergy.cc , RNAFreeEnergy_TB.cc
- loop_energy() : RNAFreeEnergy_TB.cc
- make_pair_table() : RNAFreeEnergy_TB.cc
- update_fold_params() : RNAFreeEnergy.cc , RNAFreeEnergy_TB.cc
- ViennaFoldParamsSet : RNAFreeEnergy_TB.cc