ell-3.0.0 File List

Here is a list of all files with brief descriptions:

src/doxygen.hh [code]
src/ell/BarrierSampling.cc [code]
src/ell/BarrierSampling.hh [code]
src/ell/Basin.cc [code]
src/ell/Basin.hh [code]
src/ell/DirectWalk.cc [code]
src/ell/DirectWalk.hh [code]
src/ell/IterableNeighbors.cc [code]
src/ell/IterableNeighbors.hh [code]
src/ell/LandscapeTopology.cc [code]
src/ell/LandscapeTopology.hh [code]
src/ell/LT_AutoFlood.hh [code]
src/ell/LT_BarrierTree.cc [code]
src/ell/LT_BarrierTree.hh [code]
src/ell/LT_Funnels.cc [code]
src/ell/LT_Funnels.hh [code]
src/ell/LT_MinimaSet.cc [code]
src/ell/LT_MinimaSet.hh [code]
src/ell/LT_SaddleNet.cc [code]
src/ell/LT_SaddleNet.hh [code]
src/ell/MinimumMapping.cc [code]
src/ell/MinimumMapping.hh [code]
src/ell/MinimumSelector.cc [code]
src/ell/MinimumSelector.hh [code]
src/ell/NeighborGenerator.cc [code]
src/ell/NeighborGenerator.hh [code]
src/ell/S_Explicit.cc [code]
src/ell/S_Explicit.hh [code]
src/ell/SamplingAbortionCriterion.cc [code]
src/ell/SamplingAbortionCriterion.hh [code]
src/ell/SC_Counting.cc [code]
src/ell/SC_Listing.cc [code]
src/ell/SC_ListingCompr.cc [code]
src/ell/SC_Maximum.cc [code]
src/ell/SC_Outstream.cc [code]
src/ell/SC_PartitionFunction.cc [code]
src/ell/State.hh [code]
src/ell/StateAcceptor.cc [code]
src/ell/StateAcceptor.hh [code]
src/ell/StateCollector.hh [code]
src/ell/StatePairCollector.cc [code]
src/ell/StatePairCollector.hh [code]
src/ell/Walk.cc [code]
src/ell/Walk.hh [code]
src/ell/WalkAbortionCriterion.cc [code]
src/ell/WalkAbortionCriterion.hh [code]
src/ell/protein/S_LP.cc [code]
src/ell/protein/S_LP.hh [code]
src/ell/protein/S_LP_PullM.cc [code]
src/ell/protein/S_LP_PullM.hh [code]
src/ell/rna/DW_RNA.cc [code]
src/ell/rna/DW_RNA.hh [code]
src/ell/rna/RNAFreeEnergy.cc [code]
src/ell/rna/RNAFreeEnergy.hh [code]
src/ell/rna/RNAFreeEnergy_TB.cc [code]
src/ell/rna/RNAFreeEnergy_TB.hh [code]
src/ell/rna/S_RNAfe_SingleM.cc [code]
src/ell/rna/S_RNAfe_SingleM.hh [code]
src/ell/rna/S_RNAfe_SingleM_TB.cc [code]
src/ell/rna/S_RNAfe_SingleM_TB.hh [code]
src/ell/spinglass/S_SG_Ising.cc [code]
src/ell/spinglass/S_SG_Ising.hh [code]
src/ell/spinglass/S_SG_NPP.cc [code]
src/ell/spinglass/S_SG_NPP.hh [code]
src/ell/util/PriorityQueue.hh [code]