LocARNA::McC_ali_matrices_t Member List

This is the complete list of members for LocARNA::McC_ali_matrices_t, including all inherited members.

a2s(size_t s, size_t i) const	LocARNA::McC_ali_matrices_t	[inline]
bppm(size_t i, size_t j) const	LocARNA::McC_matrices_base	[inline]
exp_params() const	LocARNA::McC_matrices_base	[inline]
expMLbase(size_t i) const	LocARNA::McC_matrices_base	[inline]
iidx(size_t i, size_t j) const	LocARNA::McC_matrices_base	[inline]
jidx(size_t i, size_t j) const	LocARNA::McC_matrices_base	[inline]
kT() const	LocARNA::McC_matrices_base	[inline]
McC_ali_matrices_t(vrna_fold_compound_t *vc)	LocARNA::McC_ali_matrices_t	[explicit]
McC_matrices_base(vrna_fold_compound_t *vc)	LocARNA::McC_matrices_base	[explicit, protected]
pair(size_t c, size_t d) const	LocARNA::McC_matrices_base	[inline]
pscore(size_t i, size_t j) const	LocARNA::McC_ali_matrices_t	[inline]
q1k(size_t k) const	LocARNA::McC_matrices_base	[inline]
qb(size_t i, size_t j) const	LocARNA::McC_matrices_base	[inline]
qln(size_t l) const	LocARNA::McC_matrices_base	[inline]
qm(size_t i, size_t j) const	LocARNA::McC_matrices_base	[inline]
S(size_t s, size_t i) const	LocARNA::McC_ali_matrices_t	[inline]
S3(size_t s, size_t i) const	LocARNA::McC_ali_matrices_t	[inline]
S5(size_t s, size_t i) const	LocARNA::McC_ali_matrices_t	[inline]
scale(size_t i) const	LocARNA::McC_matrices_base	[inline]
Ss(size_t s) const (defined in LocARNA::McC_ali_matrices_t)	LocARNA::McC_ali_matrices_t	[inline]
vc_	LocARNA::McC_matrices_base	[protected]
~McC_ali_matrices_t()	LocARNA::McC_ali_matrices_t	[virtual]
~McC_matrices_base()	LocARNA::McC_matrices_base	[virtual]